Nilanjan

Nilanjan Chatterjee, PhD

Bloomberg Distinguished Professor

Department of Biostatistics, Bloomberg School of Public Health Department of Oncology, School of Medicine

Johns Hopkins University

Contact:
Johns Hopkins Bloomberg School of Public Health
Department of Biostatistics
615 N Wolfe Street
Baltimore, MD 21205
Phone: 410-502-8971
Fax: 410-955-0958
E-Mail: nilanjan@jhu.edu
Administrative Coordinator:
Kim Clay
Phone:  410-955-3067
Email:  kphilpo3@jhmi.edu

CGEN

DESCRIPTION

CGEN (Case-control Genetics) is an R package for analyzing data on case-control samples, with particular emphasis on novel methods for detecting Gene-Gene and Gene-Environment interactions.

UPDATES

The new version includes snp.score function that implements a variety of score-tests for genetic association incorporating gene-environment interactions. The function, with certain options, also allows analysis of imputed SNPs.

AUTHORS

Samsiddhi Bhattacharjee, Nilanjan Chatterjee, William Wheeler, Summer Hun and Minsun Song.